2012-05-04
Rare switching events in non-stationary systems
Publication
Publication
J. Chem. Phys. , Volume 136 - Issue Article number: 174119 p. 1- 15
Physical systems with many degrees of freedom can often be understood in terms of transitions between a small number of metastable states. For time-homogeneous systems with short-term memory these transitions are fully characterized by a set of rate constants. We consider the question how to extend such a coarse-grained description to non-stationary systems and to systems with finite memory. We identify the physical regimes in which time-dependent rates are meaningful, and state microscopic expressions that can be used to measure both externally time-dependent and history-dependent rates in microscopic simulations. Our description can be used to generalize Markov state models to time-dependent Markovian or non-Markovian systems.
Additional Metadata | |
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AIP | |
doi.org/10.1063/1.4704812 | |
J. Chem. Phys. | |
Organisation | Biochemical Networks |
Becker, N., & ten Wolde, P. R. (2012). Rare switching events in non-stationary systems. J. Chem. Phys., 136(Article number: 174119), 1–15. doi:10.1063/1.4704812 |