AMOLF Institutional Repository: AMOLF Institutional Repository

Diffractively induced transparency and extraordinary light emission at the plasmon band edge In Proceedings

S.R.K. Rodriguez (Said)

January 2013
Multiplex CARS microscopy Book Chapter

J.P.R. Day, K.F. Domke, G. Rago (Gianluca), E.M. Vartiainen and M. Bonn (Mischa)

January 2013
Spatiotemporal focusing in opaque scattering media by wave front shaping with nonlinear feedback Article

Opt. Express, 20(28), 29237-29251.

J. Aulbach, P.M. Johnson and A. Lagendijk

December 2012
Quasi-cylindrical wave contribution in experiments on extraordinary optical transmission Article

Nature, 411-414.

F. van Beijnum, C. Rétif, C.B. Smiet, H. Liu, P. Lalanne (Philippe) and M.P. van Exter

December 2012
Superemitters in hybrid photonic systems : A simple lumping rule for the local density of optical states and its breakdown at the unitary limit Article

Phys. Rev. B, 86(Article number: 235428), 1-6.

M. Frimmer (Martin) and A.F. Koenderink (Femius)

December 2012
Single molecule investigations of Chaperone assisted protein folding Dissertation

Biophysics

A. Mashaghi (Alireza)

December 2012
Mode coupling by plasmonic surface scatterers in thin-film silicon solar cells Article

Appl. Phys. Lett., 101(22, Article number: 221110), 1-4.

M.C. van Lare, F.O. Lenzmann, M.A. Verschuuren (Marc) and A. Polman (Albert)

December 2012
Mapping the directional emission of quasi-two-dimensional photonic crystals of semiconductor nanowires using Fourier microscopy Article

Phys. Rev. B, 86(Article number: 245303), 1-7.

Y. Fontana, G. Grzela, E.P.A.M. Bakkers (Erik) and J. Gómez Rivas (Jaime)

December 2012
Long-range guided THz radiation by thin layers of water Article

Opt. Express, 20(25), 27781-27791.

R. Sczech, J. Gómez Rivas (Jaime), A. Berrier, V. Giannini, G. Pirruccio (Giuseppe), C. Debus, H. Schäfer-Eberwein and P. Haring Bolivar

December 2012
Femtosecond study of the effects of ions on the reorientation dynamics of water Article

J. Mol. Liq., 22-28.

S.T. van der Post, S. Scheidelaar and H.J. Bakker (Huib)

December 2012
Three-dimensional molecular reconstruction of rat heart with mass spectrometry imaging Article

Anal. Bioanal. Chem., 404(10), 2927-2938.

L. Fornai, A. Angelini, I. Klinkert, F.G. Giskes (Frans), G.B. Eijkel (Gert), E.R. Amstalden van Hove, L.A. Klerk, M. Fedrigo, M. Valente, G. Thiene, et al. R.M.A. Heeren (Ron)

December 2012
Carrier multiplication in bulk indium nitride Article

Appl. Phys. Lett., 101(Article number: 222113), 1-4.

S.A. Jensen, J. Versluis (Jan), E. Cánovas, J.J.H. Pijpers, I.R. Sellers and M. Bonn (Mischa)

November 2012
Protein identification in mass-spectrometry imaging Article

Trends Anal. Chem., 40(11), 28-37.

N.E. Mascini (Nadine) and R.M.A. Heeren (Ron)

November 2012
The formation of complex crusts in oil paints containing lead white and smalt: dissolution, depletion, diffusion, deposition’ In Proceedings

A. van Loon, P. Noble and J.J. Boon

November 2012
Modified light emission from emitters coupled to long-range guided modes in strongly absorbing layers Article

Opt. Express, 20(25), 27554-27561.

C. Arnold, Y. Zhang and J. Gómez Rivas (Jaime)

November 2012
Plasmonic antennas hybridized with dielectric waveguides Article

ACS Nano, 6(11), 10156-10167.

F. Bernal Arango, A. Kwadrin and A.F. Koenderink (Femius)

November 2012
Water's response to the fear of water Article

Nature, 491(7425), 533-535.

H.J. Bakker (Huib)

November 2012
Experimental phase diagram for random laser spectra Article

New J. Phys., 14(11, Article number: 113031), 1-11.

R.G.S. El-Dardiry, R. Mooiweer and A. Lagendijk

November 2012
Index mismatch aberration correction over long working distances using spatial light modulation Article

Appl. Optics, 51(33), 8034-8040.

B. Gjonaj, P.M. Johnson, M. Bonn (Mischa) and K.F. Domke

November 2012
Fundamental Limits on Sensing Chemical Concentrations with Linear Biochemical Networks Article

Phys. Rev. Lett., 109(21, Article number: 218103), 1-5.

C.C. Govern (Christopher) and P.R. ten Wolde (Pieter Rein)

November 2012
Active pixel detectors for Mass Spectrometry Imaging Dissertation

J.H. Jungmann (Julia)

November 2012
Spontaneous emission near resonant optical antennas Dissertation

Resonant Nanophotonics

M. Frimmer (Martin)

November 2012
Nanophotonic control of the Förster resonance energy transfer efficiency Article

Phys. Rev. Lett., 109(20, Article number: 203601), 1-5.

C. Blum, N. Zijlstra, A. Lagendijk, M. Wubs, A.P. Mosk (Allard), V. Subramaniam (Vinod) and W.L. Vos

November 2012
On the role of Fresnel factors in sum-frequency generation spectroscopy of metal-water and metal-oxide-water interfaces Article

J. Phys. Chem. C, 116(44), 23351-23361.

E.H.G. Backus (Ellen), N. Garcia-Araez, M. Bonn (Mischa) and H.J. Bakker (Huib)

November 2012
Non-invasive imaging through opaque scattering layers Article

Nature, 232-234.

Jacopo Bertolotti, E.G. van Putten, C. Blum, A. Lagendijk, W.L. Vos and A.P. Mosk (Allard)

November 2012
On the energetic dependence of charge separation in low-band-gap polymer/fullerene blends Article

J. Am. Chem. Soc., 134(44), 18189-18192.

St.D. Dimitrov, A.A. Bakulin (Artem), C.B. Nielsen, B.C. Schroeder, J. Du (Junping), Hugo Bronstein, H. Bronstein, I. McCulloch, R.H. Friend (Richard) and R.D. Dupuis

November 2012
Time-of-flight secondary ion mass spectrometry-based maolcular distribution distinuishing healthy and osteoarthritic human cartilage Article

Anal. Chem., 84(21), 8909-8916.

B. Cillero Pastor, G.B. Eijkel (Gert), A. Kiss, F.J. Blanco Garcia and R.M.A. Heeren (Ron)

November 2012
Multimodal imaging of hypoxia in breast cancer Dissertation

K. Chughtai

November 2012
Advanced mass calibration and visualization for FT-ICR Mass Spectrometry Imaging Article

J. Am. Soc. Mass Spectrom., 23(11), 1865-1872.

D.F. Smith (Donald), A.V. Kharchenko, M. Konijnenburg, I. Klinkert, Ljiljana Pasa-Tolic and R.M.A. Heeren (Ron)

November 2012
Research and instrumental analysis in the materials of easel paintings Book Chapter

J.H. Townsend and J.J. Boon

November 2012
Positioning of microtubule organizing centers by cortical pushing and pulling forces Article

New J. Phys., 14(Sp.I., Article number: 105025), 1-13.

N. Pavin, L. Laan (Liedewij), R. Ma, A.M. Dogterom (Marileen) and F. Jülicher

October 2012
Measuring the spatial extent of individual localized photonic states Article

Phys. Rev. B, 86(Article number: 155153), 1-5.

M. Spasenović, D.M. Beggs, P. Lalanne (Philippe), T.F. Krauss and L.K. Kuipers (Kobus)

October 2012
Measurement of a band-edge tail in the density of states of a photonic-crystal waveguide Article

Phys. Rev. B, 86(Article number: 155154), 1-5.

S.R. Huisman, G. Ctistis (Georgios), S. Stobbe (Søren), A.P. Mosk (Allard), J. Herek, A. Lagendijk, P. Lodahl, W.L. Vos and P.W.H. Pinkse

October 2012
Selective detection of bacterial layers with terahertz plasmonic antennas Article

Biomed. Opt. Express, 3(11), 2937-2949.

A. Berrier, M.C. Schaafsma, G. Nonglaton, J. Bergquist and J. Gómez Rivas (Jaime)

October 2012
Multiple actin binding domains of Ena/VASP proteins determine actin network stiffening Article

Eur. Biophys. J., 41(11), 979-990.

B. Gentry, S. van der Meulen, P. Noguera, B. Alonso-Latorre, J. Plastino and G.H. Koenderink (Gijsje)

October 2012
Light-emitting waveguide-plasmon polaritons Article

Phys. Rev. Lett., 109(16, Article number: 166803), 1-5.

S.R.K. Rodriguez (Said), S. Murai, M.A. Verschuuren (Marc) and J. Gómez Rivas (Jaime)

October 2012
Hydrogen-bond dynamics in a protic ionic liquid : evidence of large-angle jumps Article

J. Phys. Chem. Lett., 3(20), 3034-3038.

J. Hunger, Thomas Sonnleitner, L. Liu, R. Buchner, M. Bonn (Mischa) and H.J. Bakker (Huib)

October 2012
Looking at life through molecular vibrations : Biomedical applications of CARS spectro-microscopy Dissertation

G. Rago (Gianluca)

October 2012
End-on microtubule-dynein interactions and pulling-based positioning of microtubule organizing centers Article

Cell Cycle, 11(20), 3750-3757.

L. Laan (Liedewij), S. Roth (Sophie) and A.M. Dogterom (Marileen)

October 2012
Collective resonances in plasmonic crystals: size matters Article

Physica B, 407(20), 4081-4085.

S.R.K. Rodriguez (Said), M.C. Schaafsma, A. Berrier and J. Gómez Rivas (Jaime)

October 2012
Nanowire antenna emission Article

Nano Lett., 12(11), 5481-5486.

G. Grzela, R. Paniagua-Domínguez, T. Barten, Y. Fontana, J.A Sánchez-Gil and J. Gómez Rivas (Jaime)

October 2012
Autoionization and ultrafast relaxation dynamics of highly excited states in N2 Article

Phys. Rev. A, 86(4, Article number: 43404), 1-4.

M. Lucchini, K. Kim, F. Calegari, F. Kelkensberg, W. Siu, G. Sansone, M.J.J. Vrakking, M. Hochlaf and M. Nisoli

October 2012
Signaling noise enhances chemotactic drift of E. coli Article

Phys. Rev. Lett., 109(14, Article number: 148101), 1-5.

M. Flores, T.S. Shimizu (Thomas), P.R. ten Wolde (Pieter Rein) and F. Tostevin (Filipe)

October 2012
Biological tissue imaging with a position and time sensitive pixelated detector Article

J. Am. Soc. Mass Spectrom., 23(10), 1679-1688.

J.H. Jungmann (Julia), D.F. Smith (Donald), L. MacAleese (Luke), I. Klinkert, J. Visser and R.M.A. Heeren (Ron)

October 2012
Snapshots of Anderson localization beyond the ensemble average Article

Phys. Rev. B, 86(Article number: 125132), 1-4.

R.G.S. El-Dardiry, S. Faez (Sanli) and A. Lagendijk

September 2012
Attosecond streaking in a nano-plasmonic field Article

New J. Phys., 14(Article number: 93034), 1-19.

F. Kelkensberg, A.F. Koenderink (Femius) and M.J.J. Vrakking

September 2012
The polyphenol EGCG inhibits amyloid formation less efficiently at phospholipid interfaces than in bulk solution Article

J. Am. Chem. Soc., 134(36)

M.F.M. Engel, C.C. vandenAkker, M. Schleeger, K.P. Velikov (Krassimir), G.H. Koenderink (Gijsje) and M. Bonn (Mischa)

September 2012
Magnetoelectric resonant metamaterial scatterers Dissertation

Resonant Nanophotonics

I. Šersić

September 2012
Prospects of near-field plasmonic absorption enhancement in semiconductor materials using embedded Ag nanoparticles Article

Opt. Express, 20(S5 Energy Express), 641-654.

P. Spinelli and A. Polman (Albert)

September 2012
Protein logic : a statistical mechanical study of signal integration at the single-molecule level Article

Biophys. J., 1097-1107.

W.H. de Ronde, P.R. ten Wolde (Pieter Rein) and A. Mugler (Andrew)

September 2012
Loosening quantum confinement : observation of real conductivity caused by hole polarons in semiconductor nanocrystals smaller than the Bohr radius Article

Nano Lett., 12(9), 4937-4942.

R. Ulbricht, J.J.H. Pijpers, E. Groeneveld, R. Koole, C. de Mello Donega, Daniël A. Vanmaekelbergh, C. Delerue, G. Allan and M. Bonn (Mischa)

September 2012
Dispersive ground plane core shell type optical monopole antennas fabricated with electron beam induced deposition Article

ACS Nano, 6(9), 8226-8232.

H. Acar (Hakkı), T. Coenen (Toon), A. Polman (Albert) and L.K. Kuipers (Kobus)

September 2012
Plasmonic excitation and manipulation with an electron beam In Proceedings

Ernst Jan R. Vesseur, J. Aizpurua (Javier), T. Coenen (Toon), A. Reyes-Coronado, P.E. Batson and A. Polman (Albert)

August 2012
imzML - a common data format for the flexible exchange and processing of mass spectrometry imaging data Article

J. Proteomics, 75(16 SI), 5106-5110.

T. Schramm, A. Hester, I. Klinkert, J.-P. Both, R.M.A. Heeren (Ron), A. Brunelle, O. Laprevote, M.-F. Robbe, M. Stoeckli, B. Spengler, et al. A. Roempp

August 2012
Localized hypoxia results in spatially heterogeneous metabolic signatures in breast tumor models Article

Neoplasia, 14(8), 732-741.

L. Jiang, T.R. Greenwood, D. Artemov, V. Raman, P.T. Winnard Jr., R.M.A. Heeren (Ron), Z.M. Bhujwalla and K. Glunde

August 2012
Going forward : Increasing the accessibility of imaging mass spectrometry Article

J. Proteomics, 75(16), 5113-5121.

L.A. McDonnell, R.M.A. Heeren (Ron), P.E. Andrén, M. Stoeckli and G.L. Corthals

August 2012
Emerging technologies in mass spectrometry imaging Article

J. Proteomics, 75(16 SI), 5077-5092.

J.H. Jungmann (Julia) and R.M.A. Heeren (Ron)

August 2012
Mutual repression enhances the steepness and precision of gene experession boundaries Article

PLoS Comput. Biol., 8(8, Article number: 1002654), 1-17.

T.R. Sokolowski (Thomas), T. Erdmann and P.R. ten Wolde (Pieter Rein)

August 2012
Nonequilibrium fluctuations of a remodeling in vitro cytoskeleton Article

Phys. Rev. E, 86(2, Article number: 20901), 1-5.

B. Stuhrmann, M. Soares e Silva, M. Depken, F.C. MacKintosh (Fred) and G.H. Koenderink (Gijsje)

August 2012
Deep-subwavelength imaging of the modal dispersion of light Article

Nature Mater., 781-787.

R. Sapienza (Riccardo), T. Coenen (Toon), J. Renger, Martin Kuttge, N.F. van Hulst and A. Polman (Albert)

August 2012
Direct visualization of laser-driven electron multiple scattering and tunneling distance in strong-field ionization Article

Phys. Rev. Lett., 109(Article number: 73004), 1-5.

D.D. Hickstein, P. Ranitovic, S. Witte (Stefan), X.-M. Tong, Y. Huismans (Ymkje), P. Arpin, X. Zhou, K.E. Keister, C.W. Hogle, B. Zhang, et al. C. Ding, H.C. Kapteyn (Henry)

August 2012
Polarization-sensitive cathodoluminescence Fourier microscopy Article

Opt. Express, 20(17), 18679-18691.

T. Coenen (Toon) and A. Polman (Albert)

August 2012
Feed-forward loops and diamond motifs lead to tunable transmission of information in the frequency domain Article

Phys. Rev. E, 86(2, Article number: 21913), 1-24.

W.H. de Ronde, F. Tostevin (Filipe) and P.R. ten Wolde (Pieter Rein)

August 2012
Gray-tone lithography implementation of Drexhage's method for calibrating radiative and nonradiative decay constants of fluorophores Article

J. Phys. Chem. C, 116(31), 16666-16673.

A. Kwadrin and A.F. Koenderink (Femius)

August 2012
Enhanced absorption and emission of Y3Al5O12:Ce3+ thin layers prepared by epoxide-catalyzed sol-gel method Article

Opt. Mater. Express, 2(8), 1111-1120.

S. Murai, M.A. Verschuuren (Marc), G. Lozano, G. Pirruccio (Giuseppe), A.F. Koenderink (Femius) and J. Gómez Rivas (Jaime)

August 2012
Structure and dynamics of water in nonionic reverse micelles : A combined time-resolved infrared and small angle x-ray scattering study Article

J. Chem. Phys., 137(4, Article number: 44503), 1-9.

T.H. van der Loop (Tibert), M.R. Panman, S. Lotze, J. Zhang (Jing), T. Vad (Thomas), H.J. Bakker (Huib) and S. Woutersen (Sander)

July 2012
A multimodal mass spectrometry imaging approach for the study of musculoskeletal tissues Article

Int. J. Mass Spectrom., 150-160.

S. Chughtai, K. Chughtai, B. Cillero Pastor, A. Kiss, P. Agrawal (Prashant), L. MacAleese (Luke) and R.M.A. Heeren (Ron)

July 2012
Polarization dependent light extinction in ensembles of polydisperse, vertical semiconductor nanowires : a Mie scattering effective medium Article

Phys. Rev. B, 86(4, Article number: 45305), 1-7.

G. Grzela, D. Hourlier and J. Gómez Rivas (Jaime)

July 2012
Scaling laws for photoelectron holography in the midinfrared wavelength regime Article

Phys. Rev. Lett., 109(Article number: 13002), 1-5.

Y. Huismans (Ymkje), A. Gijsbertsen (Arjan), A.S. Stodolna (Aneta), J.H. Jungmann (Julia), A. Rouzée, P.S.W.M. Logman, F. Lépine, C. Cauchy, S. Zamith, Tatiana Marchenko, et al. G. Berden, B. Redlich, M. Ivanov, T.-M. Yan, D. Bauer, M.J.J. Vrakking

July 2012
Digital plasmonics : from concept to microscopy Dissertation

B. Gjonaj

July 2012
Hydration dynamics of hyaluronan and dextran Article

Biophys. J., 103(1), 10-12.

J. Hunger, A. Bernecker, H.J. Bakker (Huib), M. Bonn (Mischa) and R.P. Richter (Ralf)

July 2012
Microtubules interacting with a boundary : mean length and mean first-passage times Article

Phys. Rev. E, 86(1, Article number: 11902), 1-11.

B.M. Mulder (Bela)

July 2012
Nanomachientjes organiseren het skelet van de cel Article

NTvN, 78(7), 294-297.

L. Laan (Liedewij) and A.M. Dogterom (Marileen)

July 2012
Analysis of phase dependent frequency shifts in simulated FTMS transients using the filtered diagonalization method Article

Int. J. Mass Spectrom., 19-24.

F.E. Leach III, A.V. Kharchenko, Gleb Vladimirov, K. Aizikov, P.B. O'Connor, E.N. Nikolaev, R.M.A. Heeren (Ron) and I.J. Amster

July 2012
Charge carriers in semiconductors : Loose, confined, trapped Dissertation

R. Ulbricht

June 2012
Assessing Charge Carrier Trapping in Silicon Nanowires Using Picosecond Conductivity Measurements Article

Nano Lett., 12(7), 3821-3827.

R. Ulbricht, R. Kurstjens and M. Bonn (Mischa)

June 2012
Spontaneous helicity of a polymer with side-loops confined to a cylinder Article

Phys. Rev. Lett., 108(Article number: 268305), 1-5.

D. Chaudhuri (Debasish) and B.M. Mulder (Bela)

June 2012
Sources and gain in photonic random media Dissertation

R.G.S. El-Dardiry

June 2012
Direct observation of photoinduced charge-transfer states at organic-inorganic interface Article

Phys. Rev. Lett., 108(24, Article number: 246605), 1-5.

Y. Vaynzof (Yana), A.A. Bakulin (Artem), S. Gélinas and R.H. Friend (Richard)

June 2012
Transparent conducting silver nanowire networks Article

Nano Lett., 12(6), 3138-3144.

J. van de Groep (Jorik), P. Spinelli and A. Polman (Albert)

June 2012
Partial nonlinear reciprocity breaking through ultrafast dynamics in a random photonic medium Article

Phys. Rev. Lett., 108(22, Article number: 223906), 1-5.

O.L. Muskens, P. Venn, T. van der Beek and T. Wellens

May 2012
Ubiquity of optical activity in planar metamaterial scatterers Article

Phys. Rev. Lett., 108(22, Article number: 223903), 1-5.

I. Šersić, M.A. van de Haar (Marie), F. Bernal Arango and A.F. Koenderink (Femius)

May 2012
Modeling a cortical auxin maximum for nodulation : different signatures of potential strategies Article

Frontiers Plant Biophys. Model., 3(Article number: 96), 1-19.

E.E. Deinum (Eva), R. Geurts, T. Bisseling and B.M. Mulder (Bela)

May 2012
Zelfassemblerende materialen Article

De Groene Amsterdammer, [136](21)

M.E. Leunissen

May 2012
De analoge computers van het leven Article

De Groene Amsterdammer, [136](21)

P.R. ten Wolde (Pieter Rein)

May 2012
Het belang van licht en fotonische technologie voor de samenleving Article

De Groene Amsterdammer, [136](21)

A.F. Koenderink (Femius)

May 2012
Ultrafast tunable optical delay line based on indirect photonic transitions Article

Phys. Rev. Lett., 108(Article number: 213901), 1-4.

D.M. Beggs, I.H. Rey, T. Kampfrath, N. Rotenberg (Nir), L.K. Kuipers (Kobus) and T.F. Krauss

May 2012
Interfacial water facilitates energy transfer by inducing extended vibrations in membrane lipids Article

J. Phys. Chem. B, 116(22), 6455-6460.

A. Mashaghi (Alireza), P. Partovi-Azar, T. Jadidi, N. Nafari, K. Esfarjani, P. Maass, M.R.R. Tabar, H.J. Bakker (Huib) and M. Bonn (Mischa)

May 2012
The combined effect of cations and anions on the dynamics of water Article

Phys. Chem. Chem. Phys., 14(18), 6280-6288.

S.T. van der Post and H.J. Bakker (Huib)

May 2012
Ultrafast vibrational energy relaxation of the water bridge Article

Phys. Chem. Chem. Phys., 14(18), 6160-6164.

L. Piatkowski, A.D. Wexler, E.C. Fuchs, H. Schoenmaker (Hinco) and H.J. Bakker (Huib)

May 2012
Multiplexing biochemical signals Dissertation

Biochemical Networks

W.H. de Ronde

May 2012
Rare switching events in non-stationary systems Article

J. Chem. Phys., 136(Article number: 174119), 1-15.

N.B. Becker (Nils) and P.R. ten Wolde (Pieter Rein)

May 2012
Non-Stationary Forward Flux Sampling Article

J. Chem. Phys., 136(Article number: 174118), 1-18.

N.B. Becker (Nils), R.J. Allen and P.R. ten Wolde (Pieter Rein)

May 2012
Sum-frequency generation spectroscopy of cinnamate modified cellulosic polymer at the air-water interface Article

J. Phys. Chem. B

E.H.G. Backus (Ellen), S. Abrakhi, S. Péralta, O. Fichet and S. Cantin (Sophie)

May 2012
Optical antennas Article

Int. J. Opt., 2012(2012, Article number: 365109), 1-4.

N. Bonod, A. Bouhelier, A.F. Koenderink (Femius) and A. Passian

May 2012
Controlling waves in space and time for imaging and focusing in complex media Article

Nature Photon., 6(5), 283-292.

A.P. Mosk (Allard), A. Lagendijk, G. Lerosey and M. Fink

May 2012
Probing structure and dynamics with photoelectrons generated in strong fields Dissertation

Y. Huismans (Ymkje)

May 2012
Biophysics : The price of accuracy Article

Nature Phys., 361-362.

P.R. ten Wolde (Pieter Rein)

May 2012
Notes on Anderson localization : reply Article

Phys. Today, 65(5), 11-12.

A. Lagendijk, B.A. van Tiggelen and D.S. Wiersma

May 2012
Dissecting spindle architecture with a laser Article

Cell, 149(3), 507-509.

P. Recouvreux and A.M. Dogterom (Marileen)

April 2012

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